Home/AutoSelect

AutoSelect

Describe a lightweight task profile. The Router returns a transparent recommendation or an evidence-aware refusal.

Synthetic evidence preview. This release cannot support biological claims.

No expression matrix or cell-level data leaves this browser.

Data

Describe the assay and cell count. Unknown scale is a first-class choice and is not invented as a band.

Modality

Which assay generated this dataset?

scRNA-seqGene expression counts.scATAC-seqChromatin accessibility.MultiomePaired RNA and ATAC from the same cells.

Scale

Approximate cell count, or Unknown if the band is not known.

Fewer than 10k cellsSmall atlas or pilot study.10k to 50k cellsTypical tissue-scale experiment.50k to 200k cellsLarge tissue or multi-sample study.More than 200k cellsAtlas-scale collection.Unknown / not sureWidens matching and lowers confidence. Not treated as a guessed band.

Select a data modality. Continue unlocks once this step is answered.

Connected benchmark surfaces

The traceability layer links the benchmark companion and atlas without changing the synthetic ranking catalog.

scCCVGBen Atlas

Related Site

Read the benchmark atlas that anchors the traceability layer.

Open scCCVGBen Atlas

scCCVGBen

Related Site

Open the companion benchmark application and resource cards.

Open scCCVGBen

Provenance How this recommender traces back to the thesis Show details

Thesis traceability atlas

13 identities

Thirteen published method identities

This atlas records provenance and the application handoff across the thesis layers. It is a non-executable traceability view, not a leaderboard and not a claim that every method is available through the browser Router.

Thesis identities

Synthetic candidates

Local provider families

iVAE
representation
traceability only
Identity resolved · evidence software_resource · executable false
Paper Code
CCVGAE
representation
traceability only
Identity resolved · evidence software_resource · executable false
Paper Code
LiVAE
geometry
traceability only
Identity resolved · evidence software_resource · executable false
Paper Code
GAHIB
geometry
traceability only
Identity resolved · evidence software_resource · executable false
Paper Code GAHIB Companion Site
MCCVAE
geometry
traceability only
Identity resolved · evidence software_resource · executable false
Paper Code MCCVAE · landing-only
GNODEVAE
dynamics
traceability only
Identity resolved · evidence software_resource · executable false
Paper Code
CODE
dynamics
traceability only
Identity resolved · evidence software_resource · executable false
Paper Code
iAODE
dynamics
traceability only
Identity resolved · evidence software_resource · executable false
Paper Code iAODE Pages
LAIOR
dynamics
traceability only
Identity resolved · evidence software_resource · executable false
Paper Code LAIOR Benchmarks
scRL
decision
traceability only
Identity resolved · evidence software_resource · executable false
Paper Code
scFocus
decision
traceability only
Identity resolved · evidence software_resource · executable false
Paper Code
CLOP-DiT
generation_evaluation
traceability only
Identity resolved · evidence software_resource · executable false
Paper Code
scCCVGBen
generation_evaluation
traceability only
Identity resolved · evidence software_resource · executable false
Paper Code scCCVGBen scCCVGBen Atlas

Thesis integration

Thirteen publications, one traceable application layer

AutoSelect is the reproducibility bridge across the thesis line: it makes method identity, evidence provenance, and downstream configuration visible without turning the published results into a universal leaderboard. The thesis atlas contains 13 identities; the interactive ranking remains a separate 3-candidate synthetic release, and the Model Router is local infrastructure rather than a browser API.

Publications: 13
Layers: 5
Resolved identities: 13/13
Config templates: 13/13
Pinned distributions: 8/13
Pin contract matches: 4/5
Synthetic candidates: 3
Admitted score cells: 30
Study groups: 18
Evaluable holdouts: 0

Representation
Where are cell states represented?
iVAE · CCVGAE
Geometry
Which structure does the latent space preserve?
LiVAE · GAHIB · MCCVAE
Dynamics
How can state change be followed over time?
GNODEVAE · CODE · iAODE · LAIOR
Decision
How are branches and fate choices described?
scRL · scFocus
Generation & evaluation
How are candidate states generated and compared?
CLOP-DiT · scCCVGBen

The application layer is a traceable software resource. AutoSelect evaluates profiles against the synthetic browser release; four pinned method contracts (LiVAE, CODE, GNODEVAE, and LAIOR) are now shape-checked, and the dedicated scRL adapter now has a bounded synthetic CPU runtime receipt. Its scrl-adapter-v1 protocol is backed by a source-tree compiler binding. That binding is now recorded and executed against the pinned source, giving the thesis line a reproducible application handoff. The public catalogue remains deliberately non-executable while its software-resource and holdout gates are kept explicit.

chain: pinned_chain

claim: software_resource

holdouts: 0

scRL receipt: scrl-adapter-v1 · PASS · 10/10 episodes · 64-cell synthetic CPU · compiler binding: source_bound · source: code/scRL · execution: PASS